class: center, middle, inverse, title-slide .title[ # Working with multiple data frames<br> 🤝 ] .author[ ### S. Mason Garrison ] --- layout: true <div class="my-footer"> <span> <a href="https://DataScience4Psych.github.io/DataScience4Psych/" target="_blank">Data Science for Psychologists</a> </span> </div> --- class: middle # .hand[We...] .huge[.green[have]] .hand[multiple data frames] .huge[.pink[want]] .hand[to bring them together] --- ## Data: Women in science Information on 10 women in science who changed the world .small[ |name | |:------------------| |Ada Lovelace | |Marie Curie | |Janaki Ammal | |Chien-Shiung Wu | |Katherine Johnson | |Rosalind Franklin | |Vera Rubin | |Gladys West | |Flossie Wong-Staal | |Jennifer Doudna | ] .footnote[ Source: [Discover Magazine](https://www.discovermagazine.com/the-sciences/meet-10-women-in-science-who-changed-the-world) ] --- ## Inputs + Professions ``` r professions ``` ``` ## # A tibble: 10 × 2 ## name profession ## <chr> <chr> ## 1 Ada Lovelace Mathematician ## 2 Marie Curie Physicist and Chemist ## 3 Janaki Ammal Botanist ## 4 Chien-Shiung Wu Physicist ## 5 Katherine Johnson Mathematician ## 6 Rosalind Franklin Chemist ## 7 Vera Rubin Astronomer ## 8 Gladys West Mathematician ## 9 Flossie Wong-Staal Virologist and Molecular Biologist ## 10 Jennifer Doudna Biochemist ``` --- ## Inputs + Dates ``` r dates ``` ``` ## # A tibble: 8 × 3 ## name birth_year death_year ## <chr> <dbl> <dbl> ## 1 Janaki Ammal 1897 1984 ## 2 Chien-Shiung Wu 1912 1997 ## 3 Katherine Johnson 1918 2020 ## 4 Rosalind Franklin 1920 1958 ## 5 Vera Rubin 1928 2016 ## 6 Gladys West 1930 NA ## 7 Flossie Wong-Staal 1947 NA ## 8 Jennifer Doudna 1964 NA ``` --- ## Inputs + Works ``` r works ``` ``` ## # A tibble: 9 × 2 ## name known_for ## <chr> <chr> ## 1 Ada Lovelace first computer algorithm ## 2 Marie Curie theory of radioactivity, discovery of elem… ## 3 Janaki Ammal hybrid species, biodiversity protection ## 4 Chien-Shiung Wu confim and refine theory of radioactive bet… ## 5 Katherine Johnson calculations of orbital mechanics critical … ## 6 Vera Rubin existence of dark matter ## 7 Gladys West mathematical modeling of the shape of the E… ## 8 Flossie Wong-Staal first scientist to clone HIV and create a m… ## 9 Jennifer Doudna one of the primary developers of CRISPR, a … ``` --- ## Desired output ``` ## # A tibble: 10 × 5 ## name profession birth_year death_year known_for ## <chr> <chr> <dbl> <dbl> <chr> ## 1 Ada Lovelace Mathematic… NA NA first co… ## 2 Marie Curie Physicist … NA NA theory o… ## 3 Janaki Ammal Botanist 1897 1984 hybrid s… ## 4 Chien-Shiung Wu Physicist 1912 1997 confim a… ## 5 Katherine Johnson Mathematic… 1918 2020 calculat… ## 6 Rosalind Franklin Chemist 1920 1958 <NA> ## 7 Vera Rubin Astronomer 1928 2016 existenc… ## 8 Gladys West Mathematic… 1930 NA mathemat… ## 9 Flossie Wong-Staal Virologist… 1947 NA first sc… ## 10 Jennifer Doudna Biochemist 1964 NA one of t… ``` --- ## Inputs, reminder .pull-left[.midi[ ``` r names(professions) ``` ``` ## [1] "name" "profession" ``` ``` r names(dates) ``` ``` ## [1] "name" "birth_year" "death_year" ``` ``` r names(works) ``` ``` ## [1] "name" "known_for" ``` ] ] .pull-right[ ``` r nrow(professions) ``` ``` ## [1] 10 ``` ``` r nrow(dates) ``` ``` ## [1] 8 ``` ``` r nrow(works) ``` ``` ## [1] 9 ``` ] --- class: middle # Joining data frames --- ## Joining data frames ``` r something_join(x, y) ``` - `left_join()`: all rows from x - `right_join()`: all rows from y - `full_join()`: all rows from both x and y - `semi_join()`: all rows from x where there are matching values in y, keeping just columns from x - `inner_join()`: all rows from x where there are matching values in y, return all combination of multiple matches in the case of multiple matches - `anti_join()`: return all rows from x where there are not matching values in y, never duplicate rows of x - ... --- ## Setup For the next few slides... .pull-left[ ``` r x ``` ``` ## # A tibble: 3 × 2 ## id value_x ## <dbl> <chr> ## 1 1 x1 ## 2 2 x2 ## 3 3 x3 ``` ] .pull-right[ ``` r y ``` ``` ## # A tibble: 3 × 2 ## id value_y ## <dbl> <chr> ## 1 1 y1 ## 2 2 y2 ## 3 4 y4 ``` ] --- ## `left_join()` .pull-left[ <img src="img/left-join.gif" width="80%" style="background-color: #FDF6E3" style="display: block; margin: auto;" /> ] .pull-right[ ``` r left_join(x, y) ``` ``` ## # A tibble: 3 × 3 ## id value_x value_y ## <dbl> <chr> <chr> ## 1 1 x1 y1 ## 2 2 x2 y2 ## 3 3 x3 <NA> ``` ] --- ## `left_join()` ``` r professions %>% * left_join(dates) ``` ``` ## # A tibble: 10 × 4 ## name profession birth_year death_year ## <chr> <chr> <dbl> <dbl> ## 1 Ada Lovelace Mathematician NA NA ## 2 Marie Curie Physicist and Chemist NA NA ## 3 Janaki Ammal Botanist 1897 1984 ## 4 Chien-Shiung Wu Physicist 1912 1997 ## 5 Katherine Johnson Mathematician 1918 2020 ## 6 Rosalind Franklin Chemist 1920 1958 ## 7 Vera Rubin Astronomer 1928 2016 ## 8 Gladys West Mathematician 1930 NA ## 9 Flossie Wong-Staal Virologist and Molec… 1947 NA ## 10 Jennifer Doudna Biochemist 1964 NA ``` --- ## `right_join()` .pull-left[ <img src="img/right-join.gif" width="80%" style="background-color: #FDF6E3" style="display: block; margin: auto;" /> ] .pull-right[ ``` r right_join(x, y) ``` ``` ## # A tibble: 3 × 3 ## id value_x value_y ## <dbl> <chr> <chr> ## 1 1 x1 y1 ## 2 2 x2 y2 ## 3 4 <NA> y4 ``` ] --- ## `right_join()` ``` r professions %>% * right_join(dates) ``` ``` ## # A tibble: 8 × 4 ## name profession birth_year death_year ## <chr> <chr> <dbl> <dbl> ## 1 Janaki Ammal Botanist 1897 1984 ## 2 Chien-Shiung Wu Physicist 1912 1997 ## 3 Katherine Johnson Mathematician 1918 2020 ## 4 Rosalind Franklin Chemist 1920 1958 ## 5 Vera Rubin Astronomer 1928 2016 ## 6 Gladys West Mathematician 1930 NA ## 7 Flossie Wong-Staal Virologist and Molecu… 1947 NA ## 8 Jennifer Doudna Biochemist 1964 NA ``` --- ## `full_join()` .pull-left[ <img src="img/full-join.gif" width="80%" style="background-color: #FDF6E3" style="display: block; margin: auto;" /> ] .pull-right[ ``` r full_join(x, y) ``` ``` ## # A tibble: 4 × 3 ## id value_x value_y ## <dbl> <chr> <chr> ## 1 1 x1 y1 ## 2 2 x2 y2 ## 3 3 x3 <NA> ## 4 4 <NA> y4 ``` ] --- ## `full_join()` ``` r dates %>% * full_join(works) ``` ``` ## # A tibble: 10 × 4 ## name birth_year death_year known_for ## <chr> <dbl> <dbl> <chr> ## 1 Janaki Ammal 1897 1984 hybrid species, biod… ## 2 Chien-Shiung Wu 1912 1997 confim and refine th… ## 3 Katherine Johnson 1918 2020 calculations of orbi… ## 4 Rosalind Franklin 1920 1958 <NA> ## 5 Vera Rubin 1928 2016 existence of dark ma… ## 6 Gladys West 1930 NA mathematical modelin… ## 7 Flossie Wong-Staal 1947 NA first scientist to c… ## 8 Jennifer Doudna 1964 NA one of the primary d… ## 9 Ada Lovelace NA NA first computer algor… ## 10 Marie Curie NA NA theory of radioactiv… ``` --- ## `inner_join()` .pull-left[ <img src="img/inner-join.gif" width="80%" style="background-color: #FDF6E3" style="display: block; margin: auto;" /> ] .pull-right[ ``` r inner_join(x, y) ``` ``` ## # A tibble: 2 × 3 ## id value_x value_y ## <dbl> <chr> <chr> ## 1 1 x1 y1 ## 2 2 x2 y2 ``` ] --- ## `inner_join()` ``` r dates %>% * inner_join(works) ``` ``` ## # A tibble: 7 × 4 ## name birth_year death_year known_for ## <chr> <dbl> <dbl> <chr> ## 1 Janaki Ammal 1897 1984 hybrid species, biodi… ## 2 Chien-Shiung Wu 1912 1997 confim and refine the… ## 3 Katherine Johnson 1918 2020 calculations of orbit… ## 4 Vera Rubin 1928 2016 existence of dark mat… ## 5 Gladys West 1930 NA mathematical modeling… ## 6 Flossie Wong-Staal 1947 NA first scientist to cl… ## 7 Jennifer Doudna 1964 NA one of the primary de… ``` --- ## `semi_join()` .pull-left[ <img src="img/semi-join.gif" width="80%" style="background-color: #FDF6E3" style="display: block; margin: auto;" /> ] .pull-right[ ``` r semi_join(x, y) ``` ``` ## # A tibble: 2 × 2 ## id value_x ## <dbl> <chr> ## 1 1 x1 ## 2 2 x2 ``` ] --- ## `semi_join()` ``` r dates %>% * semi_join(works) ``` ``` ## # A tibble: 7 × 3 ## name birth_year death_year ## <chr> <dbl> <dbl> ## 1 Janaki Ammal 1897 1984 ## 2 Chien-Shiung Wu 1912 1997 ## 3 Katherine Johnson 1918 2020 ## 4 Vera Rubin 1928 2016 ## 5 Gladys West 1930 NA ## 6 Flossie Wong-Staal 1947 NA ## 7 Jennifer Doudna 1964 NA ``` --- ## `anti_join()` .pull-left[ <img src="img/anti-join.gif" width="80%" style="background-color: #FDF6E3" style="display: block; margin: auto;" /> ] .pull-right[ ``` r anti_join(x, y) ``` ``` ## # A tibble: 1 × 2 ## id value_x ## <dbl> <chr> ## 1 3 x3 ``` ] --- ## `anti_join()` ``` r dates %>% * anti_join(works) ``` ``` ## # A tibble: 1 × 3 ## name birth_year death_year ## <chr> <dbl> <dbl> ## 1 Rosalind Franklin 1920 1958 ``` --- ## Putting it altogether ``` r professions %>% left_join(dates) %>% left_join(works) ``` ``` ## # A tibble: 10 × 5 ## name profession birth_year death_year known_for ## <chr> <chr> <dbl> <dbl> <chr> ## 1 Ada Lovelace Mathematic… NA NA first co… ## 2 Marie Curie Physicist … NA NA theory o… ## 3 Janaki Ammal Botanist 1897 1984 hybrid s… ## 4 Chien-Shiung Wu Physicist 1912 1997 confim a… ## 5 Katherine Johnson Mathematic… 1918 2020 calculat… ## 6 Rosalind Franklin Chemist 1920 1958 <NA> ## 7 Vera Rubin Astronomer 1928 2016 existenc… ## 8 Gladys West Mathematic… 1930 NA mathemat… ## 9 Flossie Wong-Staal Virologist… 1947 NA first sc… ## 10 Jennifer Doudna Biochemist 1964 NA one of t… ``` --- class: middle # Wrapping Up... --- class: middle # Case studies --- ## Case: Student records - Have: - Enrollment: official university enrollment records - Survey: Student provided info missing students who never filled it out and including students who filled it out but dropped the class - Want: Survey info for all enrolled in class -- .pull-left[ ``` r enrollment ``` ``` ## # A tibble: 3 × 2 ## id name ## <dbl> <chr> ## 1 1 Dave Friday ## 2 2 Hermine ## 3 3 Sura Selvarajah ``` ] .pull-right[ ``` r survey ``` ``` ## # A tibble: 4 × 3 ## id name username ## <dbl> <chr> <chr> ## 1 2 Hermine bakealongwithhermine ## 2 3 Sura surasbakes ## 3 4 Peter peter_bakes ## 4 5 Mark thebakingbuddha ``` ] --- ## Student records + In class ``` r enrollment %>% * left_join(survey, by = "id") ``` ``` ## # A tibble: 3 × 4 ## id name.x name.y username ## <dbl> <chr> <chr> <chr> ## 1 1 Dave Friday <NA> <NA> ## 2 2 Hermine Hermine bakealongwithhermine ## 3 3 Sura Selvarajah Sura surasbakes ``` ] --- ## Student records + Survey missing ``` r enrollment %>% * anti_join(survey, by = "id") ``` ``` ## # A tibble: 1 × 2 ## id name ## <dbl> <chr> ## 1 1 Dave Friday ``` --- ## Student records + Dropped ``` r survey %>% * anti_join(enrollment, by = "id") ``` ``` ## # A tibble: 2 × 3 ## id name username ## <dbl> <chr> <chr> ## 1 4 Peter peter_bakes ## 2 5 Mark thebakingbuddha ``` --- class: middle # Case study: Grocery sales --- ## Grocery sales - Have: - Purchases: One row per customer per item, listing purchases they made - Prices: One row per item in the store, listing their prices - Want: Total revenue -- .pull-left[ ``` r purchases ``` ``` ## # A tibble: 5 × 2 ## customer_id item ## <dbl> <chr> ## 1 1 bread ## 2 1 milk ## 3 1 banana ## 4 2 milk ## 5 2 toilet paper ``` ] .pull-right[ ``` r prices ``` ``` ## # A tibble: 5 × 2 ## item price ## <chr> <dbl> ## 1 avocado 0.5 ## 2 banana 0.15 ## 3 bread 1 ## 4 milk 0.8 ## 5 toilet paper 3 ``` ] --- ## Grocery sales + Total revenue .pull-left[ ``` r purchases %>% * left_join(prices) ``` ``` ## # A tibble: 5 × 3 ## customer_id item price ## <dbl> <chr> <dbl> ## 1 1 bread 1 ## 2 1 milk 0.8 ## 3 1 banana 0.15 ## 4 2 milk 0.8 ## 5 2 toilet paper 3 ``` ] .pull-right[ ``` r purchases %>% left_join(prices) %>% * summarize(total_revenue = sum(price)) ``` ``` ## # A tibble: 1 × 1 ## total_revenue ## <dbl> ## 1 5.75 ``` ] --- ## Grocery sales + Revenue per customer .pull-left[ ``` r purchases %>% left_join(prices) ``` ``` ## # A tibble: 5 × 3 ## customer_id item price ## <dbl> <chr> <dbl> ## 1 1 bread 1 ## 2 1 milk 0.8 ## 3 1 banana 0.15 ## 4 2 milk 0.8 ## 5 2 toilet paper 3 ``` ] .pull-right[ ``` r purchases %>% left_join(prices) %>% * group_by(customer_id) %>% summarize(total_revenue = sum(price)) ``` ``` ## # A tibble: 2 × 2 ## customer_id total_revenue ## <dbl> <dbl> ## 1 1 1.95 ## 2 2 3.8 ``` ] --- # Sources - Mine Çetinkaya-Rundel's Data Science in a Box ([link](https://datasciencebox.org/)) --- class: middle # Wrapping Up...